Browse of TCMCG075C00147 protein

CDS

Accession Number	TCMCG075C00147
gbkey	CDS
Protein Id	XP_007046584.2
Location	complement(join(514970..515108,515180..515233,515423..515494,515649..518755,518835..519093,519450..519736,519812..520147,520231..520372,520448..520668,520773..520934,521032..521190,521277..521576,522323..522586,522849..522932))
Gene	LOC18610701
GeneID	18610701
Organism	Theobroma cacao

Protein

Length	1861aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA341501
db_source	XM_007046522.2
Definition	PREDICTED: DNA-directed RNA polymerase II subunit 1 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category	K
Description	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC	-
KEGG_Module	M00180        [VIEW IN KEGG]
KEGG_Reaction	R00435        [VIEW IN KEGG] R00441        [VIEW IN KEGG] R00442        [VIEW IN KEGG] R00443        [VIEW IN KEGG]
KEGG_rclass	RC02795        [VIEW IN KEGG]
BRITE	br01611        [VIEW IN KEGG] ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03021        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K03006        [VIEW IN KEGG]
EC	2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00230        [VIEW IN KEGG] ko00240        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko03020        [VIEW IN KEGG] ko05016        [VIEW IN KEGG] ko05168        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] map00230        [VIEW IN KEGG] map00240        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map03020        [VIEW IN KEGG] map05016        [VIEW IN KEGG] map05168        [VIEW IN KEGG] map05169        [VIEW IN KEGG]
GOs	GO:0000428        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0003899        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005665        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009058        [VIEW IN EMBL-EBI] GO:0009059        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016591        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0016772        [VIEW IN EMBL-EBI] GO:0016779        [VIEW IN EMBL-EBI] GO:0018130        [VIEW IN EMBL-EBI] GO:0019438        [VIEW IN EMBL-EBI] GO:0030880        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032774        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034062        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034654        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044249        [VIEW IN EMBL-EBI] GO:0044271        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044451        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0055029        [VIEW IN EMBL-EBI] GO:0061695        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097747        [VIEW IN EMBL-EBI] GO:0140098        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901362        [VIEW IN EMBL-EBI] GO:1901576        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGATTTGCGATTCCCTTATTCTCCCGCGGAGGTCGCCAAGGTCCGCATGGTCCAGTTCGGCATCCTCAGCCCCGACGAAATCCGGCAAATGTCGGTGGTGCAGATTGAGCACGGTGAAACGACCGAGAGGGGAAAACCTAAAGTGGGCGGTTTAAGTGACCCACGGCTGGGCACAATTGATAGGAAGATGAAGTGTGAGACGTGTACGGCCAACATGGCAGAGTGTCCAGGGCATTTTGGGCACTTGGAGCTTGCCAAGCCTATGTTTCATATTGGGTTTATGAAAACTGTGCTCAGTATAATGAGATGTGTCTGCTTCAATTGCTCAAAAATTCTCGCTGATGAGGAAGAGCATAAATTTAAGCAGGCATTGAAAATAAAGAATCCAAAGAATAGGCTGAAAAAGATCTTAGATGCATGCAAGAATAAATCTAAATGTGAGGGCGGTGATGAAATTGATGTCCAAGGTCAAGATACAGAGGAGCCTGTAAAAAAGAGTCGTGGTGGCTGTGGTGCTCAGCAGCCAAAGCTGAGTATTGATGGTATGAAGATGATTGCAGAATATAAGCCCCAGAGGAAGAGGAATGATGATCAGGAACAACTTCCTGAACCTGTGGAAAGAAAACAGACTCTCACTGCTGAACGGGTTCTTAGTGTCTTGAAGAGGATAAGCGACGAGGACTGCCAACTATTAGGCTTAAATCCTAAGTTTGCCCGTCCAGATTGGATGATTCTTCAAGTACTTCCAATACCTCCACCTCCTGTTAGACCTTCTGTGATGATGGACACTTCGTCTAGGAGTGAGGATGACTTAACACATGCGTTGGCTATGATCATTCGCCACAATGAGAACTTGAGGAGACAGGAGAGAAATGGGTCACCTGCACATATCATATCTGAATTTGCGCAGTTGTTGCAGTTCCATGTAGCAACATATTTTGACAATGAGTTGCCTGGACTGCCAAGGGCTACGCAGAGATCTGGGAGACCTATTAAATCTATTTGTAGTAGGCTTAAGGCGAAAGAGGGCCGGATTAGGGGTAACTTGATGGGAAAAAGGGTTGACTTTTCAGCTCGAACGGTTATTACACCAGATCCAAATATCAATATTGATGAACTTGGAGTACCCTGGAGTATTGCTTTAAACCTCACGTATCCAGAAACTGTGACTCCATATAACATTGAGAGGTTGAAAGAGCTTGTGGAATATGGGCCTCATCCTCCACCTGGAAAGACTGGTGCTAAGTATATCATAAGAGATGATGGACAAAGGCTTGATCTTCGTTACCTGAAGAAAAGTAGTGATCATCACTTAGAGCTTGGTTATAAGGTGGAGCGGCATTTAAATGATGGAGATTTTGTCCTTTTTAACCGTCAACCTAGTCTCCATAAAATGTCAATCATGGGCCACAGAATCAGGATTATGCCGTACTCTACATTTCGTCTAAATTTGTCTGTTACTTCGCCATACAATGCTGATTTTGATGGTGATGAAATGAATATGCATGTTCCTCAATCATTTGAGACAAGAGCAGAGGTATTGGAGCTCATGATGGTGCCTAAGTGCATTGTGTCCCCTCAATCAAATAGGCCTGTTATGGGGATTGTCCAGGATACACTTCTAGGATGCCGTAAAATCACCAAAAGGGATACTTTCATAGAAAAGGATGTATTCATGAATATATTAATGTGGTGGGAGGACTTTGATGGAAAGGTTCCAGCTCCTGCAATTCTAAAGCCACGACCACTTTGGACTGGGAAGCAGGTTTTTAATCTTATCATTCCAAAGCAGATAAATCTGCTGAGAAATTCTGCATGGCATTCAGAAACTGAGACTGGGTTTATCACCCCTGGGGATACTCAAGTTCGAATAGAAAAAGGAGAGCTACTGTCTGGCACTCTTTGCAAGAAGGCACTTGGAACATCTTCTGGAAGTCTTATACATGTCATTTGGGAAGAGGTTGGTCCTGATGCAGCTCGGAAATTTTTGGGACATACACAATGGCTTGTTAATTATTGGCTGCTGCAGAATGCCTTTAGTATTGGTATTGGAGATACCATTGCTGATGCAGCAACAATGGAAAAAATTAATGAAACTATTTCAAAAGCCAAAGAGGAAGTGAAAAACCTCATTGTGAAAGCCCAAAACAAAGATTTAGAGCCTGAACCTGGAAGAACTATGATGGAATCTTTTGAAAACAAAGTTAACCAGGTGTTGAATAAAGCTCGTGACGATGCAGGAAACAGTGCACAAAAAAGTTTGTCAGAAAGCAACAACCTTAAGGCAATGGTTACTGCAGGATCCAAGGGAAGTTTCATTAACATATCCCAAATGACAGCTTGTGTGGGTCAGCAGAATGTTGAGGGAAAGCGAATCCCATTTGGGTTCATAGATCGTACATTGCCCCATTTTACCAAGGATGATTATGGCCCTGAAAGTCGTGGGTTTGTGGAGAACTCGTACTTGCGTGGGTTGACCCCACAAGAGTTCTTTTTCCATGCCATGGGTGGTAGAGAAGGTCTCATAGATACTGCGGTTAAGACTTCTGAGACTGGGTACATACAGAGGCGACTTGTGAAGGCAATGGAGGATATTATGGTTAAATATGATGGAACTGTGAGGAACTCATTGGGGGATGTTATTCAATTCCTCTATGGTGAAGATGGTATGGATTCTGTATGGATAGAATCTCAGAAGCTGGATTCTTTGAAGATGAAGAAATCAGAATTTGATAGGGTCTTCAGATATAATATAGATGATGAAAGCTGGAATCCAACTTCTTATATGTTACCAGAGCACATTGAAGATTTGAGAACTATCCAAGAATTGCGTGATGTATTCGAAGCTGAAGTTCAAAAACTTGAAGCTGATAGATACCAACTTGGAACAGAGATTGCAGTCACGGGTGATAGTAATTGGCCTTTGCCTGTTAACTTGAAGAGGCTTATCTGGAATGCACAGAAGACTTTTAAAGTTGATTTTAGAAGGGTGTCTGATTTGCACCCAGTGGAAATTGTAGATTCTGTTGATAAGCTCCAGGAAAGGTTAAAGGTTGTTCCGGGTACAGATCCTCTGAGTGTGGAAGCCCAAAAGAATGCCACCCTCTTCTTCAGCATTTTGCTTCGCAGTACTTTGGCCAGTAAAAGGGTCTTGCAGGAATATAGACTTACAAAGGAAGCATTTGAGTGGGTTATTGGTGAAATAGAGTCACGATTCTTGCAGTCTTTAGTAGCACCTGGTGAGATGATAGGTTGTGTTGCTGCACAATCAATTGGTGAGCCTGCTACTCAAATGACTCTTAACACCTTCCACTATGCTGGTGTGAGTGCAAAGAATGTTACCCTTGGTGTTCCCAGGTTGAGGGAAATTATTAATGTAGCTAAGAAAATCAAAACACCTTCTCTTTCAGTCTACCTCTCTCCTGAAGCTAGTAAGACAAAGGAGAAGGCCAAGAATGTCCAATGTGCTTTAGAATACACTACTCTTCGGAGTGTTACTCATGCTACTGAAGTATGGTATGATCCAGACCCCACGAGCACAATTATTGAGGAGGATATTGACTTTGTTAAGTCCTACTATGAAATGCCAGATGAAGAGGTTGCCCCTGAAAAAATCTCCCCTTGGCTTCTGCGCATAGAGTTGAATCGCGAGATGATGGTTGATAAGAAGTTGAGTATGGCTGACATAGCTGAGAAGATCAATCTGGAATTTGATGACGATTTGACTTGCATATTTAACGATGACAATGCAGAGAAGCTGATCCTACGCATCCGTATCATGAATGATGAAGGCCCGAAGGGTGAACTGAATGATGAGTCTGCTGAAGATGATGTATTCTTGAAGAAGATTGAAAGCAACATGCTGACGGAAATGGCACTTCGAGGTATCCCAGACATCAACAAGGTGTTCATTAAACATAGTAAAGCAAGCAAGTTTGATGAGGCTGATGGATATAAGACTGGAGAGGAGTGGGTGTTGGATACAGAAGGTGTCAATCTCTTGGCTGTCATGTGCCACGAAGATGTTGATGCAAGGAGAACAACAAGCAATCACTTGATTGAAGTGATTGAAGTTCTTGGAATTGAAGCAGTCCGCCGGTCCTTGTTGGATGAATTGCGAGTTGTGATATCATTTGATGGGTCTTATGTGAATTATCGTCATCTGGCTATACTCTGTGATACAATGACCTATCGTGGCCACTTGATGGCTATCACCCGTCATGGCATCAACCGCAATGATACAGGGCCTATGATGAGGTGCTCATTTGAGGAAACAGTAGATATTCTCCTTGATGCTGCTGTCTATGCTGAGTCGGATTATTTGAGGGGTGTGACGGAGAATATAATGTTGGGTCAGCTTGCACCAATTGGAACAGGAGACTGTGCCTTGTATCTTAATGATGAGATGTTGAAGAATGCCATTGAACTTCAGCTACCTAGTTACATGGAAGGTCTGGAATTTGGCATGACGCCTGCTCGTTCTCCAGTGTCAGGAACTCCTTATCATGAAGGCATGATGTCTCCAAGTTATTTGCTGAGTCCAAATCTCCGTCTCTCACCCGTTACGGATGCTCAGTTCTCACCTTATGTAGGTGGGATGGCATTCTCTCCTACGTCGTCCCCTGGTTACAGCCCATCATCTCCAGGATACAGTCCATCCTCCCCTGGCTACAGTCCTACCTCTCCTGGTTATAGTCCTACATCTCCTGGGTATAGTCCCACCTCTCCTGGGTACAGCCCCACATCACCTACTTACAGTCCTAGTTCGCCAGGTTACAGTCCAACAAGTCCAGCATATTCTCCTACAAGTCCCTCTTATTCTCCGACCTCACCGAGCTACAGCCCTACCTCTCCAAGTTACAGCCCTACATCTCCAAGTTACAGTCCCACTTCACCAAGTTATAGTCCCACATCTCCCAGCTATAGTCCAACTTCACCTAGCTACAGCCCCACTTCACCCGTATATAGCCCAACTTCACCAGCATACAGCCCCACTTCACCCGCATATAGCCCCACTTCTCCATCATACAGCCCAACATCCCCATCATACAGCCCTACATCTCCTTCTTACAGCCCAACCTCACCCTCCTATAGCCCCACATCTCCATCATACAGCCCTACTTCACCAGCTTATAGCCCCACTTCTCCAGGGTACAGTCCAACCTCACCAAGTTATAGTCCCACGTCACCAAGCTATAGTCCTACCTCTCCAAGTTACAATCCACAGTCAGCCAAGTACAGTCCATCTCTTGCGTACTCACCAAGCAGTCCAAGGTTGTCTCCGTCAAGTCCTTATAGTCCAACTTCACCAAATTACAGCCCAACATCACCATCATATTCACCGACTTCTCCATCTTACTCCCCTTCAAGTCCAACATACAGTCCTAGCAGCCCTTATAATTCTGGAGTGAGTCCAGACTACAGCCCAAGTTCGCCACAGTACAGTCCAAGTGCTGGGTACTCCCCTAGTGCTCCAGGGTATTCACCATCATCAACTAGCCAGTACACCCCACAAACAAGCAACAAGGATGATCGGGCGACGAAGGATGATAGAAGCAGTAAAGATGACAGGAGTAAACGATAA

Protein:   MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHKFKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSIDGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKDLEPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFRYNIDDESWNPTSYMLPEHIEDLRTIQELRDVFEAEVQKLEADRYQLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVVPGTDPLSVEAQKNATLFFSILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLSPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPTSTIIEEDIDFVKSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEGPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYKTGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLRLSPVTDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGYSPSSTSQYTPQTSNKDDRATKDDRSSKDDRSKR